Research output

Research output per year 1996 2014 2015 2016 2017 2018 2019 2021 2022 2024 2025

• 179 Contribution to conference proceeding
• 175 Journal article
• 99 Oral presentation at a conference
• 76 Poster at a conference
• 69 More
  • 37 Chapter in book/report
  • 12 Report
  • 8 Invited talk/keynote at a conference
  • 5 Review article
  • 4 Letter/short communication
  • 1 Book
  • 1 Other contribution to book/report
  • 1 Other publication (not peer-reviewed)

Research output per year

Research output per year

Search results

• 2022

  Faecal pollution as potential driver of antibiotic resistance genes in the Danube River

  Schachner, I., Kolm, C., Vierheilig, J., Savio, D., Zarfel, G., Koller, M., Kittinger, C., Jakwerth, S., Linke, R. B., Kolarević, S., Kračun-Kolarević, M., Toth, E., Farnleitner, A. & Kirschner, A. K. T., 2022, Electronic Abstract Book - FEMS Conference on Microbiology. 2 p.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding
• 2021

  Current trends in microbial (fecal) source tracking (MST): a short overview

  Farnleitner, A. H., Demeter, K. & Linke, R., 2021, Abstracts.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• High persistence of genetic and cultivation-based bacterial fecal indicators in communal waste water at 5°C supports proportional autosampling procedures over 24h

  Mayer, R., Linke, R., Vierheilig, J., Reischer, G., Mach, R. L., Kirschner, A. K. T., Zessner, M., Farnleitner, A. H. & Sommer, R., 2021, Abstracts.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Modelling the fate and transport of microbial pathogens during floods and rainfall events in an alluvial wetland area supported by microbial source tracking

  Derx, J., Linke, R., Demeter, K., Komma, J., Cervero-Aragó, S., Schijven, J., Sommer, R., Walochnik, J., Kirschner, A., Blaschke, A. P. & Farnleitner, A. H., 2021, EGU General Assembly 2021. Copernicus

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

  Open Access

• Molecular fecal pollution diagnostics and source tracking: New approaches and future possibilities for rapid, inexpensive and on-site applicable water quality test systems

  Kolm, C., Reischer, G., Martzy, R. & Farnleitner, A. H., 2021, Abstracts of Lectures & Posters.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Upscaling transport of Bacillus subtilis endospores and phiX174 coliphages in heterogeneous porous media from the column to the field scale

  Oudega, T., Lindner, G., Derx, J., Farnleitner, A., Sommer, R., Blaschke, A. & Stevenson, M., 2021, EGU General Assembly 2021. Copernicus

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

  Open Access
• 2020

  Identifying faecal pollution sources in urban surface water resources to support water safety management

  Kilic, H. S., Cervero-Aragó, S., Frick, C., Linke, R., Schijven, J., Kirschner, A., Lindner, G., Walochnik, J., Sommer, R., Blaschke, A. P., Farnleitner, A. H. & Derx, J., 2020, First International Conference on Urban Water Interfaces (UWI).

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Prevalence and diversity of the intestinal parasite Giardia spp. in urban waters in Vienna, Austria

  Cervero-Aragó, S., Häfeli, I., Lindner, G., Kilic, H. S., Derx, J., Linke, R., Farnleitner, A. H., Blaschke, A. P., Sommer, R. & Walochnik, J., 2020, 39th Meeting of the German Society for Protozoology.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Wasser & Gesundheit: Internationale Herausforderungen und Möglichkeiten

  Farnleitner, A. H., 2020, Abstracts.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding
• 2019

  Combining flow cytometric and taxonomic analysis of bacterial community dynamics to study the biostability of drinking water resources -Part 1: Flow cytometric determination of microbial cell numbers

  Vierheilig, J., Savio, D. F., Jakwerth, S., Karl, M., Goll, T., Fiedler, F., Brandl, H., Kandler, W., Sommer, R., Farnleitner, A. H. & Kirschner, A. K. T., 2019, Abstractbook.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Combining flow cytometric and taxonomic analysis of bacterial community dynamics to study the biostability of drinking water resources -Part 2: High throughput 16S rRNA gene amplicon sequencing

  Savio, D. F., Vierheilig, J., Karl, M., Houdek, J., Jakwerth, S., Fiedler, F., Goll, T., Brandl, H., Kandler, W., Sommer, R., Kirschner, A. K. T. & Farnleitner, A. H., 2019, Abstractbook.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Comparison of removal rates for Bacillus subtilis spores for different flow conditions

  Oudega, T., Lindner, G., Farnleitner, A. H., Sommer, R., Kerber, G. & Blaschke, A. P., 2019, Abstractbook.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Detection of a microbial source tracking marker by isothermal helicasedependent amplification and a nucleic acid lateralflow strip test

  Kolm, C., Martzy, R., Führer, M., Mach, R. L., Krska, R., Baumgartner, S., Farnleitner, A. H. & Reischer, G., 2019, Abstractbook.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Detection of a microbial source tracking marker by isothermal helicase - dependent amplification and a nucleic acid lateral-flow strip test

  Kolm, C., Martzy, R., Führer, M., Mach, R. L., Krska, R., Baumgartner, S., Farnleitner, A. & Reischer, G. H., 30 Sept 2019, Abstractbook.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

  Open Access

• Effect of climatic and demographic changes and the upgrading ofwastewater infrastructure on the bacterial faecal pollution of a large river and on the associated health risks

  Demeter, K., Derx, J., Schijven, J. F., Sommer, R., Cervero-Arago, S., Lindner, G., Zoufal-Hruza, C. M., Linke, R., Savio, D. F., Ixenmaier, S., Kirschner, A. K. T., Tomenendal, A., Blaschke, A. P. & Farnleitner, A. H., 2019, Abstractbook.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Factors shaping the intestinal microbiome of vertebrate faecal sources: unravelling the role of diet and host phylogeny

  Reischer, G., Youngblut, N. D., Walters, W., Schuster, N., Walzer, C., Stalder, G. L., Ley, R. E. & Farnleitner, A. H., 2019, Abstractbook.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Highthroughput 16S rRNA gene amplicon sequencing for the characterisation of the drinking water microbiome from an alpine karst spring

  Savio, D. F., Karl, M., Stadler, P., Reischer, G., Demeter, K., Linke, R., Blaschke, A. P., Mach, R. L., Kirschner, A. K. T., Stadler, H. & Farnleitner, A. H., 2019, Abstractbook.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• How do future changes in climate, population and investments in wastewater management affect the microbial drinking water safety requirements of large river catchments?

  Derx, J., Demeter, K., Schijven, J. F., Sommer, R., Cervero-Arago, S., Lindner, G., Zoufal-Hruza, C. M., Linke, R., Savio, D. F., Ixenmaier, S., Kirschner, A. K. T., Kromp, H., Blaschke, A. P. & Farnleitner, A. H., 2019, Abstractbook.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Infectious Enterovirus in the Danube River

  Zoufal-Hruza, C. M., Frick, C., Derx, J., Savio, D. F., Seidl, D., Nadiotis-Tsaka, T., Sommer, R., Blaschke, A. P. & Farnleitner, A. H., 2019, Abstractbook.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Loss of DNA to surface-reactive matrix compounds during extraction - the need for comprehensive process controls in molecular diagnostics ofwater samples

  Linke, R., Zeki, S., Mayer, R., Keiblinger, K., Mach, R. L., Derx, J., Sommer, R., Reischer, G. & Farnleitner, A. H., 2019, Abstractbook.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Poikilothermic animals as a previously unrecognized source of fecal indicator bacteria

  Frick, C., Vierheilig, J., Zornig, H., Antensteiner, R., Baumgartner, C., Bucher, C., Blaschke, A. P., Derx, J., Kirschner, A. K. T., Ryzinska-Paier, G., Mayer, R., Seidl, D., Nadiotis-Tsaka, T., Sommer, R. & Farnleitner, A. H., 2019, Abstractbook.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Proliferation potential - Drinking water: Standardization and quality assurance

  Lindner, G., Gmeiner, E., Knetsch, S., Lettl, A., Holzhammer, E., Farnleitner, A. H. & Sommer, R., 2019, Abstractbook.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Quantification and prediction of Vibrio cholerae non01/non0139 in bathing waters

  Rehm, C., Vierheilig, J., Kolm, C., Jakwerth, S., Hein, T., Farnleitner, A. H., Reischer, G. & Kirschner, A. K. T., 2019, Abstractbook.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Sources, Transport Paths and Infection Risks during the use of Urban Surface Waters for Recreational Activities

  Kilic, H. S., Cervero-Arago, S., Frick, C., Linke, R., Schijven, J. F., Kirschner, A. K. T., Lindner, G., Walochnik, J., Sommer, R., Blaschke, A. P., Farnleitner, A. H. & Derx, J., 2019, Abstractbook.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Source tracking of microbial faecal pollution along a 2600 km stretch of the River Danube

  Kirschner, A. K. T., Reischer, G., Jakwerth, S., Savio, D. F., Ixenmaier, S., Toth, E., Sommer, R., Mach, R. L., Linke, R., Eiler, A., Kolarevic, S. & Farnleitner, A. H., 2019, Abstractbook.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding
• 2018

  A field-deployable concept for the rapid molecular detection of fecal contamination in water

  Martzy, R., Kolm, C., Mach, R. L., Krska, R., Jakwerth, S., Kirschner, A. K. T., Sommer, R., Farnleitner, A. H. & Reischer, G., 2018, Abstacts.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• A novel barcode-analysis of bovine-fecal contaminated waters using leuB DNA sequence variation in Bacteroides species

  Scott, S., Brown, L., Franklin, J., Farnleitner, A. H. & Crozier, J. B., 2018, Abstracts. 2 p.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Cell-based detection of abundant faecal indicator bacteria in water

  Horejs, J., Jakwerth, S., Sommer, R., Farnleitner, A. H. & Kirschner, A. K. T., 2018, Abstracts. 2 p.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Comparative analysis of state-of-the-art mitochondrial and bacterial quantitative PCR assays for microbial faecal source tracking in drinking water resources

  Karl, M., Linke, R., Ixenmaier, S., Mayer, R., Sommer, R., Kirschner, A. K. T., Farnleitner, A. H. & Savio, D. F., 2018, Abstracts.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Cultivation-independent diagnostics of microbial contamination of explanted knee and hip prostheses from sonication fluids

  Glassner, T., Linke, R., Farnleitner, A. H., Waldhör, K., Halabi, M. & Kirschner, A. K. T., 2018, Abstracts. 2 p.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Elucidating the extent and sources of faecal pollution along the whole Danube River: when Robert Koch meets Kary Mullis

  Farnleitner, A. H., Savio, D. F., Jakwerth, S., Ixenmaier, S., Toth, E., Sommer, R., Linke, R., Mach, R. L., Kolarevic, S., Reischer, G. & Kirschner, A. K. T., 2018, Abstracts.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Introducing an internal process control for the application of quantitative PCR in health-related water quality monitoring

  Bogner, D., Mayer, R., Reischer, G., Farnleitner, A. H. & Linke, R., 2018, Abstracts .

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Spatiotemporal variability of groundwater bacterial biomass and activity in a highly dynamic riverbank filtration system used for drinking water abstraction

  Kirschner, A. K. T., van Driezum, I. H., Jakwerth, S., Lindner, G., Farnleitner, A. H., Sommer, R. & Blaschke, A. P., 2018, Abstracts. 2 p.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Tracking ruminant fecal pollution in water by isothermal amplification and a disposable strip test

  Kolm, C., Martzy, R., Führer, M., Mach, R. L., Krska, R., Baumgartner, S., Farnleitner, A. H. & Reischer, G., 2018, Abstracts.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Vermehrungspotenzial - Trinkwasser: Standardisierung und Qualitätssicherung

  Lindner, G., Gemeiner, E., Knetsch, S., Lettl, A., Holzhammer, E., Kirschner, A. K. T., Farnleitner, A. H. & Sommer, R., 2018, Abstracts.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding
• 2017

  A complementary isothermal amplification method to the U.S EPA qPCR approach for the detection of enterococci in environmental waters

  Kolm, C., Martzy, R., Brunner, K., Mach, R. L., Krska, R., Heinze, G., Sommer, R., Reischer, G. & Farnleitner, A. H., 2017, Book of Abstracts. 2 p.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• A loop-mediated isothermal amplification (LAMP) assay for the rapid detection of Enterococcus spp. in water

  Martzy, R., Kolm, C., Brunner, K., Mach, R. L., Krska, R., Sinkovec, H., Sommer, R., Farnleitner, A. H. & Reischer, G., 2017, Book of Abstracts. 2 p.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• An Isothermal Amplification Method Complementary to US EPA qPCR for the Detection of Enterococci in Environmental Waters

  Kolm, C., Martzy, R., Brunner, K., Mach, R. L., Krska, R., Heinze, G., Sommer, R., Reischer, G. & Farnleitner, A. H., 2017, Water Microbiology 2017.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Defining Novel Molecular Marker Candidates for Fecal Indication and Source Tracking Using a Metagenomic Vertebrate Fecal Source Database

  Reischer, G., Ley, R. E. & Farnleitner, A. H., 2017, Water Microbiology 2017.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Exploring indicators of interdisciplinary research and education success

  Carr, G., Blanch, A., Blaschke, A. P., Brouwer, R., Bucher, C., Farnleitner, A. H., Fürnkranz-Prskawetz, A., Loucks, D. P., Morgenroth, E., Parajka, J. D., Pfeifer, N., Rechberger, H., Wagner, W., Zessner, M. & Blöschl, G., 2017, EGU General Assembly 2017. Copernicus Publications

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Human-Associated Bacteroidetes MST Markers in Communal and Domestic Wastewater and Comparison to Standard/Alternative Indicators of Faecal Pollution

  Mayer, R., Lukas, E., Bofill-Mas, S., Reischer, G., Schade, M., Fernandez-Cassi, X., Kirschner, A. K. T., Girones, R., Zessner, M., Sommer, R. & Farnleitner, A. H., 2017, Water Microbiology 2017.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Linking Fecal Indicators, Microbial Source Tracking Markers and Pathogens to Characterize an Urban Stretch of the Danube River at Vienna as a Water Resource

  Demeter, K., Linke, R., Ixenmaier, S., Mayer, R., Sommer, R., Lindner, G., Kirschner, A. K. T., Zoufal-Hruza, C. M., Frick, C., Derx, J., Blaschke, A. P. & Farnleitner, A. H., 2017, Water Microbiology 2017.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Modelling the fate of organic micropollutants during bank filtration along a large and highly dynamic river

  van Driezum, I. H., Derx, J., Oudega, T., Saracevic, E., Kirschner, A., Sommer, R., Farnleitner, A. H. & Blaschke, A. P., 2017, Conference Proceeding.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Opening Pandora's box Unmasking the Need for a Continuous Sample Processing Control for PCR Based Fecal Marker Analysis

  Linke, R., Zeki, S., Mayer, R., Keiblinger, K., Mach, R. L., Sommer, R., Reischer, G. & Farnleitner, A. H., 2017, Water Microbiology 2017.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Poikilothermic Animals as a Previously Unrecognized Source of Fecal Indicator Bacteria

  Demeter, K., Vierheilig, J., Baumgartner, C., Bucher, C., Blaschke, A. P., Derx, J., Kirschner, A., Ryzinska-Paier, G., Mayer, R., Sommer, R., Farnleitner, A. H. & Frick, C., 2017, International Symposium on Health-Related Water Microbiology 2017 Abstract Book .

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Quantitative PCR tools for cultivation-independent analysis of microbial faecal pollution in water - the need for a continuous sample processing control

  Linke, R., Zeki, S., Mayer, R., Keiblinger, K., Mach, R. L., Sommer, R., Reischer, G. & Farnleitner, A. H., 2017, Book of Abstracts.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Removal of microbial pathogens in a sandy gravel aquifer under forced-gradient subsurface flow conditions

  Oudega, T., Derx, J., van Driezum, I. H., Sommer, R., Kirschner, A., Farnleitner, A. H. & Blaschke, A. P., 2017, EGU General Assembly 2017. Copernicus Publications

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Ship-borne measurements of enzymatic GLUC activity on large water bodies: A rapid screening tool to localize point sources of potential microbial pollution

  Stadler, P., Loken, L., Crawford, J., Schramm, P., Sorsa, K., Kuhn, C., Savio, D. F., Striegl, R., Butman, D., Stanley, E., Farnleitner, A. H. & Zessner, M., 2017, Transboundary Management of Pollutants.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• Ship-borne measurements of microbial enzymatic activity: A rapid biochemical indicator for microbial water quality monitoring

  Stadler, P., Loken, L., Crawford, J., Schramm, P., Sorsa, K., Kuhn, C., Savio, D., Striegl, R., Butman, D., Stanley, E., Farnleitner, A. H. & Zessner, M., 2017, EGU General Assembly 2017. Copernicus Publications

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding

• The QMRAcatch Modelling Approach: Using Best Available Pathogen, Indicator and Source Tracking Data to Support Catchment Protection & Water Safety Management

  Derx, J., Schijven, J. F., Sommer, R., Zoufal-Hruza, C. M., Reischer, G., Kirschner, A. K. T., Frick, C., Blaschke, A. P. & Farnleitner, A. H., 2017, Water Microbiology 2017.

  Research output: Contribution to book/report/conference proceeding › Contribution to conference proceeding